About the Platform

AgriBioStat Analytics Suite provides an integrated environment for agricultural researchers, plant breeders, and bioinformaticians. Our platform bridges the gap between traditional agricultural statistics and modern multi-omics analysis, offering web-based tools that generate publication-ready outputs.

Designed for both non-programmers and experts, our tools simplify complex statistical and bioinformatics workflows while maintaining the flexibility required for advanced research applications. All tools are built on robust R packages and deployed through secure Shiny servers.

AgroMultiEnvStat Pro – Advanced Agricultural Multi‑Environment Trial Analysis

Integrated Modules

1. AMMI & G×E Stability

AMMI ANOVA and interaction decomposition
Stability indices (ASV, Wi, SIPC, etc.)
AMMI1 & AMMI2 biplots
Genotype‑focused and environment‑focused views

2. BLUP Analysis

Single and multi‑environment BLUPs
Variance component estimation
Confidence intervals
Performance heatmaps

3. ANCOVA

Multiple covariates
Type I, II, III sums of squares
Adjusted means with CIs
Diagnostic plots and interaction terms

4. Correlation Analysis

Phenotypic correlation matrices
Genotypic correlation estimation
Heatmaps, ellipse plots, mixed matrices
Exportable correlation tables

5. Path Analysis

Genotypic and phenotypic path coefficients
Direct and indirect effects
Path diagrams
Effect decomposition tables

6. Advanced Utilities

Multiple output formats (PNG, JPG)
Adjustable DPI
Batch processing
Outputs aligned with international standards

Launch AgroMultiEnvStat Pro

MultiOmics Pro – Integrated Multi‑Omics & Bioinformatics Platform

Supported Modules

Sequence Alignment

FASTA/FASTQ file processing
Multiple sequence alignment
Alignment quality metrics
Export in multiple formats

Phylogenetic Analysis

Neighbor-joining (NJ) trees
Maximum likelihood (ML) inference
Newick format export
Tree visualization and annotation

Variant Analysis

VCF file processing
SNP filtering and annotation
Population structure analysis
PCA and genetic diversity

RNA‑seq Analysis

DESeq2, edgeR, and limma workflows
Differential expression analysis
Volcano plots and heatmaps
Pathway and enrichment analysis

Launch MultiOmics Pro

How to Use the Tools

AgroMultiEnvStat Pro

Upload Data: Import Excel or CSV files with your trial data
Select Variables: Choose genotypes, environments, and traits
Configure Analysis: Set parameters for AMMI, BLUP, or other analyses
Run Analysis: Execute statistical computations
Interpret Results: Review tables, biplots, and stability indices
Export Outputs: Download figures and tables for publication

MultiOmics Pro

Choose Module: Select alignment, phylogenetics, variant, or RNA‑seq analysis
Upload Data: Provide sequences, VCF files, or count matrices
Configure Parameters: Set analysis-specific options
Run Pipeline: Execute automated analysis workflow
Review QC: Check quality control metrics and diagnostic plots
Export Results: Download visualizations and processed data

Frequently Asked Questions

Our tools are designed for agricultural researchers, plant breeders, agronomists, bioinformaticians, graduate students, and research institutions working with multi‑environment trial data or multi‑omics datasets. Both academic and industry professionals can benefit from the platform.

No programming skills are required. Both AgroMultiEnvStat Pro and MultiOmics Pro feature intuitive web interfaces with guided workflows. However, advanced users can customize analyses through additional parameter settings.

We support Excel (.xlsx), CSV, TSV for statistical data, and FASTA, FASTQ, VCF for bioinformatics analyses. All tools include data validation and format checking.

Please cite the relevant tool: For AgroMultiEnvStat Pro: Nain, Z. (2024). AgroMultiEnvStat Pro: An Integrated Platform for Agricultural Multi‑Environment Trial Analysis. For MultiOmics Pro: Include the platform URL and description in your methods section. Detailed citation information is provided in each tool's documentation.

We provide technical support for platform usage, assistance with data preparation, guidance on analysis interpretation, and consulting services for custom analyses. Research collaboration and manuscript support are also available. Contact us for specific needs.

CEO / Founder

Mr. ZULQAR NAIN

CEO / Founder – AgriBioStat

Plant Breeder & Data Science Expert Agricultural Statistics Specialist Multi‑Environment Trial & G×E Analysis Statistical Genetics & Breeding Informatics